Biological World Models0%
Centerpiece · Tool 01

World Model
Builder

Specify a biological system the way you would specify a dynamical system: state, action, observation, prior, model class, validation. The page outputs a research-ready model card.

0/11 fields · 0%
Formal Frame
(1)Latent dynamics with intervention u and hidden state z
(2)Measurement operator with observation noise η
xstate
uintervention
zhidden
yobservation
θparameters
ε, ηnoise

The scoped system you are modeling. Be narrow enough to be falsifiable.

Specific cell line, primary cell, or in-vivo compartment.

The pathological attractor you want to characterize and reverse.

Operational definition of 'healthy' — measured, not assumed.

Vector components of the latent biological state. Comma or newline separated.

The action space: drugs, CRISPR perturbations, environmental shifts.

What the assay actually returns — your measurement operator.

Latent factors that affect dynamics but are not directly measured.

Known mechanistic structure to bias the model — KEGG, Reactome, literature.

ODE, SDE, Boolean, GNN, neural ODE, mechanistic + ML hybrid, etc.

The single experiment that would falsify the model if it predicted wrong.